Custom Bioinformatics Development | GeneSpectrum
Custom Development

Custom Bioinformatics Development

Your unique research questions demand unique solutions. We build tailored bioinformatics pipelines, software, and databases to meet your specific goals.

Bespoke Solutions for Complex Challenges

Standard analysis pipelines are powerful, but they don't always fit the novel questions at the cutting edge of research. When your project requires a non-standard approach, a unique data integration, or a completely new tool, our custom development team is here to help.

Custom Software & Application Development

From intuitive web applications to powerful command-line tools, we build software that makes complex data accessible and analyzable for your team.

  • Web-based platforms for data analysis and visualization (React, Vue, Django)
  • Secure portals for data sharing and clinical reporting with HIPAA compliance
  • Development of Laboratory Information Management Systems (LIMS)
  • Case Study: GeneAssure - Our custom-built LIMS and reporting software for clinical genomics workflows

Custom Pipeline & Database Development

We design and implement automated, reproducible analysis workflows and curated databases tailored to your specific data types and research needs.

  • End-to-end automated pipelines for proprietary assays (Nextflow, Snakemake)
  • Integration of multi-omics data (genomics, transcriptomics, proteomics, metabolomics)
  • Development of specialized knowledge bases (e.g., our in-house rarevarDB for rare disease variants)
  • Cloud-based pipeline deployment for scalability and accessibility (AWS, GCP, Azure)

Strategic Bioinformatics Consulting

Leverage our deep expertise to enhance your research from the very beginning. We provide strategic guidance to ensure your experimental design is robust and your analysis plan is sound.

  • Experimental design consultation for sequencing projects (power analysis, sample size calculation)
  • Grant proposal support and methods writing for funding applications
  • Evaluation and implementation of new bioinformatics technologies and platforms
  • Data management and analysis strategy planning for large-scale projects

Technologies We Work With

Programming

Python, R, JavaScript, Java, SQL, Bash

Cloud & DevOps

AWS, Docker, Kubernetes, Nextflow

Databases

MySQL, SQLite

Have a Unique Challenge? Let's Build the Solution.

Our team is ready to help you design the best analysis strategy for your custome development needs.


Frequently Asked Questions

Find answers to common questions about our custom bioinformatics development services.