Simplify Bioinformatics
GeneSpectrum provides customized data analysis services and consultation to scientist from academia and industry, with the aim of advancing their research using cutting-edge bioinformatics methodologies. The projects we receive span a wide range of research areas in biology, biotechnology, agriculture and medicine.
We help with design, analysis and interpretation of genomic-scale experiments, involving, for example, next-generation sequencing (NGS), etc. Our services are listed below.
Clinical Genomics
- Pipeline development for Germline and Somatic variant detection
- Variant filtration and reporting services
- Annotation services
- Variant interpretation based on ACMG/AMP guidelines
- Pharmacogenomic reporting
Genomics
- WGS/WES Data Analysis
- Targeted Sequencing Analysis
- Genotyping by Sequencing (GBS/ddRAD)
- De Novo Sequencing Data Analysis
- Population Genetics Studies
Transcriptomics
- Total RNA-Seq (Whole Transcriptome) Sequencing Data Analysis
- RNA-Seq (mRNA) Data Analysis
- Small RNA Resequencing Data Analysis
- Single Cell RNA Sequencing Data Analysis
Metagenomics
- Analysis of species composition and abundance
- Genome components analysis
- Generate non-redundant gene catalog
- Gene functional annotations
- Comparative analysis among samples
Epigenomics
- DNA Methylation Analysis
- ChIP Sequencing Data Analysis
- Genome-wide Bisulphite Sequencing Data Analysis
- Differential Epigenetic Analysis
- Data Visualization Services
Single Cell RNA Seq
- Quality Control and Preprocessing
- Dimensionality Reduction
- Gene Expression Analysis
- Integrative Single-cell Analyses
- Spatial Transcriptomic Analysis